Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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AD Lung Beer Cluster Number 53 (84 genes) This page contains all miRNA mediated regulation and functional enrichment for AD Lung Beer cluster number 53. Information about lung cancer can be found on Wikipedia, and further information about the "AD Lung Beer" dataset can be found in Beer et al., 2002. Inferred miRNA Mediated Regulation Weeder-miRvestigator PITA TargetScan zzz999 hsa-mir-581 hsa-mir-548d-3p Gene Ontology Enrichment GO ID GO Term Annotated Genes in Cluster GO:0009889 regulation of biosynthetic process 33 GO:0010468 regulation of gene expression 36 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 33 GO:0019222 regulation of metabolic process 43 GO:0031326 regulation of cellular biosynthetic process 33 GO:0031440 regulation of mRNA 3'-end processing 2 GO:0031442 positive regulation of mRNA 3'-end processing 2 GO:0048518 positive regulation of biological process 35 GO:0048522 positive regulation of cellular process 33 GO:0050685 positive regulation of mRNA processing 2 GO:0050789 regulation of biological process 58 GO:0050793 regulation of developmental process 17 GO:0050794 regulation of cellular process 56 GO:0051252 regulation of RNA metabolic process 26 GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 2 GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening 2 GO:0060255 regulation of macromolecule metabolic process 38 Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value hsa-mir-548d-3p TargetScan GO:0009889 regulation of biosynthetic process 18 33 84 46 0.4244126 hsa-mir-581 PITA GO:0009889 regulation of biosynthetic process 4 33 84 7 0.08022346 hsa-mir-548d-3p TargetScan GO:0010468 regulation of gene expression 19 36 84 46 0.5381698 hsa-mir-581 PITA GO:0010468 regulation of gene expression 4 36 84 7 0.1163714 hsa-mir-548d-3p TargetScan GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 19 33 84 46 0.2611655 hsa-mir-581 PITA GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 4 33 84 7 0.08022346 hsa-mir-548d-3p TargetScan GO:0019222 regulation of metabolic process 22 43 84 46 0.6768423 hsa-mir-581 PITA GO:0019222 regulation of metabolic process 4 43 84 7 0.2365693 hsa-mir-548d-3p TargetScan GO:0031326 regulation of cellular biosynthetic process 18 33 84 46 0.4244126 hsa-mir-581 PITA GO:0031326 regulation of cellular biosynthetic process 4 33 84 7 0.08022346 hsa-mir-548d-3p TargetScan GO:0031440 regulation of mRNA 3'-end processing 2 2 84 46 0.0 hsa-mir-581 PITA GO:0031440 regulation of mRNA 3'-end processing 0 2 84 7 0.1606426 hsa-mir-548d-3p TargetScan GO:0031442 positive regulation of mRNA 3'-end processing 2 2 84 46 0.0 hsa-mir-581 PITA GO:0031442 positive regulation of mRNA 3'-end processing 0 2 84 7 0.1606426 hsa-mir-548d-3p TargetScan GO:0048518 positive regulation of biological process 20 35 84 46 0.2770677 hsa-mir-581 PITA GO:0048518 positive regulation of biological process 3 35 84 7 0.3163152 hsa-mir-548d-3p TargetScan GO:0048522 positive regulation of cellular process 19 33 84 46 0.2611655 hsa-mir-581 PITA GO:0048522 positive regulation of cellular process 3 33 84 7 0.2683644 hsa-mir-548d-3p TargetScan GO:0050685 positive regulation of mRNA processing 2 2 84 46 0.0 hsa-mir-581 PITA GO:0050685 positive regulation of mRNA processing 0 2 84 7 0.1606426 hsa-mir-548d-3p TargetScan GO:0050789 regulation of biological process 31 58 84 46 0.5481837 hsa-mir-581 PITA GO:0050789 regulation of biological process 6 58 84 7 0.06638326 hsa-mir-548d-3p TargetScan GO:0050793 regulation of developmental process 11 17 84 46 0.1153315 hsa-mir-581 PITA GO:0050793 regulation of developmental process 4 17 84 7 0.003208023 hsa-mir-548d-3p TargetScan GO:0050794 regulation of cellular process 30 56 84 46 0.5298433 hsa-mir-581 PITA GO:0050794 regulation of cellular process 6 56 84 7 0.05120306 hsa-mir-548d-3p TargetScan GO:0051252 regulation of RNA metabolic process 15 26 84 46 0.2756849 hsa-mir-581 PITA GO:0051252 regulation of RNA metabolic process 3 26 84 7 0.1289458 hsa-mir-548d-3p TargetScan GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 2 2 84 46 0.0 hsa-mir-581 PITA GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 0 2 84 7 0.1606426 hsa-mir-548d-3p TargetScan GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening 2 2 84 46 0.0 hsa-mir-581 PITA GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening 0 2 84 7 0.1606426 hsa-mir-548d-3p TargetScan GO:0060255 regulation of macromolecule metabolic process 20 38 84 46 0.5544194 hsa-mir-581 PITA GO:0060255 regulation of macromolecule metabolic process 4 38 84 7 0.1455218

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